PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Cla000891 | GATA family protein | |
Cla003202 | GATA family protein | |
Cla005181 | GATA family protein | |
Cla007645 | GATA family protein | |
Cla009267 | GATA family protein | |
Cla011213 | GATA family protein | |
Cla012658 | GATA family protein | |
Cla012926 | GATA family protein | |
Cla013765 | GATA family protein | |
Cla014213 | GATA family protein | |
Cla014262 | GATA family protein | |
Cla014546 | GATA family protein | |
Cla014581 | GATA family protein | |
Cla015118 | GATA family protein | |
Cla015488 | GATA family protein | |
Cla016606 | GATA family protein | |
Cla017176 | GATA family protein | |
Cla020560 | GATA family protein | |
Cla020879 | GATA family protein | |
Cla021773 | GATA family protein | |
Cla022146 | GATA family protein | |
Cla022147 | GATA family protein | |
Cla022200 | GATA family protein | |
Cla023109 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008