PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
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Cagra.0026s0014.1.p | GATA family protein | |
Cagra.0053s0014.1.p | GATA family protein | |
Cagra.0133s0025.1.p | GATA family protein | |
Cagra.0239s0057.1.p | GATA family protein | |
Cagra.0418s0011.1.p | GATA family protein | |
Cagra.0701s0033.1.p | GATA family protein | |
Cagra.0926s0051.1.p | GATA family protein | |
Cagra.0926s0073.1.p | GATA family protein | |
Cagra.1637s0009.1.p | GATA family protein | |
Cagra.1637s0009.2.p | GATA family protein | |
Cagra.1695s0026.1.p | GATA family protein | |
Cagra.1742s0041.1.p | GATA family protein | |
Cagra.1757s0004.1.p | GATA family protein | |
Cagra.1876s0008.1.p | GATA family protein | |
Cagra.1876s0009.1.p | GATA family protein | |
Cagra.2171s0014.1.p | GATA family protein | |
Cagra.2346s0015.1.p | GATA family protein | |
Cagra.2350s0018.1.p | GATA family protein | |
Cagra.3356s0048.1.p | GATA family protein | |
Cagra.3467s0056.1.p | GATA family protein | |
Cagra.3675s0017.1.p | GATA family protein | |
Cagra.3784s0001.1.p | GATA family protein | |
Cagra.4093s0018.1.p | GATA family protein | |
Cagra.4138s0005.1.p | GATA family protein | |
Cagra.4440s0004.1.p | GATA family protein | |
Cagra.5497s0020.1.p | GATA family protein | |
Cagra.6011s0001.1.p | GATA family protein | |
Cagra.6467s0001.1.p | GATA family protein | |
Cagra.7149s0001.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008