PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Coffea canephora (27) | Cc00_g09000 | Trihelix family protein |
Cc00_g31390 | Trihelix family protein | |
Cc00_g33210 | Trihelix family protein | |
Cc00_g33380 | Trihelix family protein | |
Cc00_g33850 | Trihelix family protein | |
Cc00_g33880 | Trihelix family protein | |
Cc01_g16960 | Trihelix family protein | |
Cc02_g15010 | Trihelix family protein | |
Cc02_g25370 | Trihelix family protein | |
Cc02_g31850 | Trihelix family protein | |
Cc03_g13070 | Trihelix family protein | |
Cc03_g13140 | Trihelix family protein | |
Cc04_g00940 | Trihelix family protein | |
Cc04_g03460 | Trihelix family protein | |
Cc05_g08380 | Trihelix family protein | |
Cc06_g01240 | Trihelix family protein | |
Cc06_g05030 | Trihelix family protein | |
Cc06_g05330 | Trihelix family protein | |
Cc06_g09510 | Trihelix family protein | |
Cc07_g17350 | Trihelix family protein | |
Cc08_g01240 | Trihelix family protein | |
Cc08_g11310 | Trihelix family protein | |
Cc09_g06700 | Trihelix family protein | |
Cc10_g14290 | Trihelix family protein | |
Cc10_g14770 | Trihelix family protein | |
Cc11_g15060 | Trihelix family protein | |
Cc11_g16470 | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179