PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Boechera stricta (35) | Bostr.0568s0044.1.p | GATA family protein |
Bostr.0568s0044.2.p | GATA family protein | |
Bostr.0697s0095.1.p | GATA family protein | |
Bostr.13158s0054.1.p | GATA family protein | |
Bostr.15774s0060.1.p | GATA family protein | |
Bostr.15774s0100.1.p | GATA family protein | |
Bostr.18351s0307.1.p | GATA family protein | |
Bostr.19424s0211.1.p | GATA family protein | |
Bostr.19424s0575.1.p | GATA family protein | |
Bostr.21132s0007.1.p | GATA family protein | |
Bostr.22252s0362.1.p | GATA family protein | |
Bostr.25219s0146.1.p | GATA family protein | |
Bostr.25219s0146.2.p | GATA family protein | |
Bostr.25993s0268.1.p | GATA family protein | |
Bostr.26675s0048.1.p | GATA family protein | |
Bostr.26833s0575.1.p | GATA family protein | |
Bostr.27991s0092.1.p | GATA family protein | |
Bostr.28243s0001.1.p | GATA family protein | |
Bostr.28625s0006.1.p | GATA family protein | |
Bostr.29827s0125.1.p | GATA family protein | |
Bostr.29827s0125.2.p | GATA family protein | |
Bostr.29827s0236.1.p | GATA family protein | |
Bostr.2983s0148.1.p | GATA family protein | |
Bostr.30275s0055.1.p | GATA family protein | |
Bostr.30275s0218.1.p | GATA family protein | |
Bostr.6864s0136.1.p | GATA family protein | |
Bostr.6864s0159.1.p | GATA family protein | |
Bostr.7867s0254.1.p | GATA family protein | |
Bostr.7867s0434.1.p | GATA family protein | |
Bostr.7867s1140.1.p | GATA family protein | |
Bostr.7867s1329.1.p | GATA family protein | |
Bostr.7867s1329.2.p | GATA family protein | |
Bostr.7867s1489.1.p | GATA family protein | |
Bostr.7867s1489.2.p | GATA family protein | |
Bostr.7867s1518.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008