PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Brast01G001300.1.p | GATA family protein | |
Brast01G149100.1.p | GATA family protein | |
Brast01G193300.1.p | GATA family protein | |
Brast01G271100.1.p | GATA family protein | |
Brast02G001800.1.p | GATA family protein | |
Brast02G039100.1.p | GATA family protein | |
Brast02G121200.1.p | GATA family protein | |
Brast02G265300.1.p | GATA family protein | |
Brast02G297100.1.p | GATA family protein | |
Brast02G297100.2.p | GATA family protein | |
Brast02G297100.3.p | GATA family protein | |
Brast02G297100.4.p | GATA family protein | |
Brast02G368900.1.p | GATA family protein | |
Brast03G140400.1.p | GATA family protein | |
Brast03G196100.1.p | GATA family protein | |
Brast04G068100.1.p | GATA family protein | |
Brast04G122400.1.p | GATA family protein | |
Brast04G250200.1.p | GATA family protein | |
Brast04G303300.1.p | GATA family protein | |
Brast04G303300.2.p | GATA family protein | |
Brast05G036500.1.p | GATA family protein | |
Brast05G257300.1.p | GATA family protein | |
Brast07G151300.1.p | GATA family protein | |
Brast07G193700.1.p | GATA family protein | |
Brast08G008500.1.p | GATA family protein | |
Brast08G056500.1.p | GATA family protein | |
Brast08G198800.1.p | GATA family protein | |
Brast09G157900.1.p | GATA family protein | |
Brast09G161000.1.p | GATA family protein | |
Brast09G230400.1.p | GATA family protein | |
Brast10G010200.1.p | GATA family protein | |
Brast10G130700.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008