PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
AT1G08000.1 | GATA transcription factor 10 | |
AT1G08000.2 | GATA transcription factor 10 | |
AT1G08010.1 | GATA transcription factor 11 | |
AT1G08010.2 | GATA transcription factor 11 | |
AT1G51600.1 | ZIM-LIKE 2 | |
AT1G51600.2 | ZIM-LIKE 2 | |
AT2G18380.1 | GATA transcription factor 20 | |
AT2G28340.1 | GATA transcription factor 13 | |
AT2G45050.1 | GATA transcription factor 2 | |
AT3G06740.1 | GATA transcription factor 15 | |
AT3G16870.1 | GATA transcription factor 17 | |
AT3G20750.1 | GATA transcription factor 29 | |
AT3G21175.1 | ZIM-like 1 | |
AT3G21175.2 | ZIM-like 1 | |
AT3G24050.1 | GATA transcription factor 1 | |
AT3G45170.1 | GATA transcription factor 14 | |
AT3G50870.1 | GATA family protein | |
AT3G51080.1 | GATA transcription factor 6 | |
AT3G54810.1 | GATA family protein | |
AT3G54810.2 | GATA family protein | |
AT3G60530.1 | GATA transcription factor 4 | |
AT4G16141.1 | GATA family protein | |
AT4G17570.1 | GATA transcription factor 26 | |
AT4G17570.2 | GATA transcription factor 26 | |
AT4G17570.3 | GATA transcription factor 26 | |
AT4G24470.1 | GATA-type zinc finger protein with TIFY domain | |
AT4G24470.2 | GATA-type zinc finger protein with TIFY domain | |
AT4G24470.3 | GATA-type zinc finger protein with TIFY domain | |
AT4G26150.1 | cytokinin-responsive gata factor 1 | |
AT4G32890.1 | GATA transcription factor 9 | |
AT4G34680.1 | GATA transcription factor 3 | |
AT4G34680.2 | GATA transcription factor 3 | |
AT4G36240.1 | GATA transcription factor 7 | |
AT4G36620.1 | GATA transcription factor 19 | |
AT5G25830.1 | GATA transcription factor 12 | |
AT5G26930.1 | GATA transcription factor 23 | |
AT5G47140.1 | GATA transcription factor 27 | |
AT5G49300.1 | GATA transcription factor 16 | |
AT5G56860.1 | GATA family protein | |
AT5G66320.1 | GATA transcription factor 5 | |
AT5G66320.2 | GATA transcription factor 5 |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008