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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
| Species | TF ID | Description |
|---|---|---|
Arabidopsis thaliana (139) | AT1G01250.1 | ERF family protein |
| AT1G03800.1 | ERF domain protein 10 | |
| AT1G04370.1 | Ethylene-responsive element binding factor 14 | |
| AT1G06160.1 | octadecanoid-responsive Arabidopsis AP2/ERF 59 | |
| AT1G12610.1 | ERF family protein | |
| AT1G12630.1 | ERF family protein | |
| AT1G12890.1 | ERF family protein | |
| AT1G12980.1 | ERF family protein | |
| AT1G15360.1 | ERF family protein | |
| AT1G19210.1 | ERF family protein | |
| AT1G21910.1 | ERF family protein | |
| AT1G22190.1 | ERF family protein | |
| AT1G22810.1 | ERF family protein | |
| AT1G22985.1 | ERF family protein | |
| AT1G24590.1 | DORNROSCHEN-like | |
| AT1G25470.1 | ERF family protein | |
| AT1G25470.2 | ERF family protein | |
| AT1G28160.1 | ERF family protein | |
| AT1G28360.1 | ERF domain protein 12 | |
| AT1G28370.1 | ERF domain protein 11 | |
| AT1G33760.1 | ERF family protein | |
| AT1G36060.1 | ERF family protein | |
| AT1G43160.1 | related to AP2 6 | |
| AT1G44830.1 | ERF family protein | |
| AT1G46768.1 | related to AP2 1 | |
| AT1G49120.1 | ERF family protein | |
| AT1G50640.1 | ethylene responsive element binding factor 3 | |
| AT1G53170.1 | ethylene response factor 8 | |
| AT1G53910.1 | related to AP2 12 | |
| AT1G53910.2 | related to AP2 12 | |
| AT1G53910.3 | related to AP2 12 | |
| AT1G63030.1 | ERF family protein | |
| AT1G63030.2 | ERF family protein | |
| AT1G64380.1 | ERF family protein | |
| AT1G68550.1 | ERF family protein | |
| AT1G68550.2 | ERF family protein | |
| AT1G71130.1 | ERF family protein | |
| AT1G71450.1 | ERF family protein | |
| AT1G71520.1 | ERF family protein | |
| AT1G72360.1 | ERF family protein | |
| AT1G72360.2 | ERF family protein | |
| AT1G72360.3 | ERF family protein | |
| AT1G74930.1 | ERF family protein | |
| AT1G75490.1 | ERF family protein | |
| AT1G77200.1 | ERF family protein | |
| AT1G77640.1 | ERF family protein | |
| AT1G78080.1 | related to AP2 4 | |
| AT1G80580.1 | ERF family protein | |
| AT2G20350.1 | ERF family protein | |
| AT2G20880.1 | ERF family protein | |
| AT2G22200.1 | ERF family protein | |
| AT2G23340.1 | DREB and EAR motif protein 3 | |
| AT2G25820.1 | ERF family protein | |
| AT2G31230.1 | ethylene-responsive element binding factor 15 | |
| AT2G33710.1 | ERF family protein | |
| AT2G33710.2 | ERF family protein | |
| AT2G35700.1 | ERF family protein | |
| AT2G36450.1 | ERF family protein | |
| AT2G38340.1 | ERF family protein | |
| AT2G40220.1 | ERF family protein | |
| AT2G40340.1 | ERF family protein | |
| AT2G40350.1 | ERF family protein | |
| AT2G44840.1 | ethylene-responsive element binding factor 13 | |
| AT2G44940.1 | ERF family protein | |
| AT2G46310.1 | cytokinin response factor 5 | |
| AT2G47520.1 | ERF family protein | |
| AT3G11020.1 | DRE/CRT-binding protein 2B | |
| AT3G14230.1 | related to AP2 2 | |
| AT3G14230.2 | related to AP2 2 | |
| AT3G14230.3 | related to AP2 2 | |
| AT3G15210.1 | ethylene responsive element binding factor 4 | |
| AT3G16280.1 | ERF family protein | |
| AT3G16770.1 | ethylene-responsive element binding protein | |
| AT3G20310.1 | ethylene response factor 7 | |
| AT3G23220.1 | ERF family protein | |
| AT3G23230.1 | ERF family protein | |
| AT3G23240.1 | ethylene response factor 1 | |
| AT3G25890.1 | ERF family protein | |
| AT3G25890.2 | ERF family protein | |
| AT3G50260.1 | cooperatively regulated by ethylene and jasmonate 1 | |
| AT3G54320.2 | ERF family protein | |
| AT3G57600.1 | ERF family protein | |
| AT3G60490.1 | ERF family protein | |
| AT3G61630.1 | cytokinin response factor 6 | |
| AT4G06746.1 | related to AP2 9 | |
| AT4G11140.1 | cytokinin response factor 1 | |
| AT4G13040.1 | ERF family protein | |
| AT4G13040.2 | ERF family protein | |
| AT4G13040.3 | ERF family protein | |
| AT4G13620.1 | ERF family protein | |
| AT4G16750.1 | ERF family protein | |
| AT4G17490.1 | ethylene responsive element binding factor 6 | |
| AT4G17500.1 | ethylene responsive element binding factor 1 | |
| AT4G18450.1 | ERF family protein | |
| AT4G23750.1 | cytokinin response factor 2 | |
| AT4G23750.2 | cytokinin response factor 2 | |
| AT4G25470.1 | C-repeat/DRE binding factor 2 | |
| AT4G25480.1 | dehydration response element B1A | |
| AT4G25490.1 | C-repeat/DRE binding factor 1 | |
| AT4G27950.1 | cytokinin response factor 4 | |
| AT4G28140.1 | ERF family protein | |
| AT4G31060.1 | ERF family protein | |
| AT4G32800.1 | ERF family protein | |
| AT4G34410.1 | redox responsive transcription factor 1 | |
| AT4G36900.1 | related to AP2 10 | |
| AT4G39780.1 | ERF family protein | |
| AT5G05410.1 | DRE-binding protein 2A | |
| AT5G05410.2 | DRE-binding protein 2A | |
| AT5G07310.1 | ERF family protein | |
| AT5G07580.1 | ERF family protein | |
| AT5G11190.1 | ERF family protein | |
| AT5G11590.1 | ERF family protein | |
| AT5G13330.1 | related to AP2 6l | |
| AT5G13910.1 | ERF family protein | |
| AT5G18450.1 | ERF family protein | |
| AT5G18560.1 | ERF family protein | |
| AT5G19790.1 | related to AP2 11 | |
| AT5G21960.1 | ERF family protein | |
| AT5G25190.1 | ERF family protein | |
| AT5G25390.1 | ERF family protein | |
| AT5G25390.2 | ERF family protein | |
| AT5G25810.1 | ERF family protein | |
| AT5G43410.1 | ERF family protein | |
| AT5G44210.1 | erf domain protein 9 | |
| AT5G47220.1 | ethylene responsive element binding factor 2 | |
| AT5G47230.1 | ethylene responsive element binding factor 5 | |
| AT5G50080.1 | ethylene response factor 110 | |
| AT5G51190.1 | ERF family protein | |
| AT5G51990.1 | C-repeat-binding factor 4 | |
| AT5G52020.1 | ERF family protein | |
| AT5G53290.1 | cytokinin response factor 3 | |
| AT5G61590.1 | ERF family protein | |
| AT5G61600.1 | ethylene response factor 104 | |
| AT5G61890.1 | ERF family protein | |
| AT5G64750.1 | ERF family protein | |
| AT5G65130.1 | ERF family protein | |
| AT5G67000.1 | ERF family protein | |
| AT5G67010.1 | ERF family protein | |
| AT5G67190.1 | DREB and EAR motif protein 2 |
The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.
It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.
After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.
Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444
The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.
Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102
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