PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Arachis ipaensis (463) | Araip.035HF | FAR1 family protein |
Araip.06M22 | FAR1 family protein | |
Araip.09KBD | FAR1 family protein | |
Araip.0Q0IR | FAR1 family protein | |
Araip.0S7S3 | FAR1 family protein | |
Araip.0U6EA | FAR1 family protein | |
Araip.0V0Z8 | FAR1 family protein | |
Araip.0VZ6J | FAR1 family protein | |
Araip.15LU1 | FAR1 family protein | |
Araip.15TR9 | FAR1 family protein | |
Araip.168FZ | FAR1 family protein | |
Araip.1J7W2 | FAR1 family protein | |
Araip.1R6SZ | FAR1 family protein | |
Araip.20ERS | FAR1 family protein | |
Araip.21NA4 | FAR1 family protein | |
Araip.21Y0I | FAR1 family protein | |
Araip.25JLZ | FAR1 family protein | |
Araip.26A5I | FAR1 family protein | |
Araip.26AUX | FAR1 family protein | |
Araip.27EE4 | FAR1 family protein | |
Araip.2B2WU | FAR1 family protein | |
Araip.2BB1N | FAR1 family protein | |
Araip.2BR22 | FAR1 family protein | |
Araip.2DF3R | FAR1 family protein | |
Araip.2DH61 | FAR1 family protein | |
Araip.2FA65 | FAR1 family protein | |
Araip.2FG6G | FAR1 family protein | |
Araip.2H1IY | FAR1 family protein | |
Araip.2MX8B | FAR1 family protein | |
Araip.2QF0G | FAR1 family protein | |
Araip.2T5BL | FAR1 family protein | |
Araip.2XW37 | FAR1 family protein | |
Araip.31NKT | FAR1 family protein | |
Araip.3280G | FAR1 family protein | |
Araip.328GZ | FAR1 family protein | |
Araip.32MBN | FAR1 family protein | |
Araip.33FK6 | FAR1 family protein | |
Araip.36Q9K | FAR1 family protein | |
Araip.37U9J | FAR1 family protein | |
Araip.389PD | FAR1 family protein | |
Araip.3BF0N | FAR1 family protein | |
Araip.3C72S | FAR1 family protein | |
Araip.3FS7Q | FAR1 family protein | |
Araip.3GG4Y | FAR1 family protein | |
Araip.3N31H | FAR1 family protein | |
Araip.3TF8Q | FAR1 family protein | |
Araip.3Y33J | FAR1 family protein | |
Araip.40KRS | FAR1 family protein | |
Araip.41ZWC | FAR1 family protein | |
Araip.422ZX | FAR1 family protein | |
Araip.43ZG0 | FAR1 family protein | |
Araip.445QM | FAR1 family protein | |
Araip.44ZRM | FAR1 family protein | |
Araip.452FQ | FAR1 family protein | |
Araip.45MP0 | FAR1 family protein | |
Araip.4DM65 | FAR1 family protein | |
Araip.4FT86 | FAR1 family protein | |
Araip.4KG33 | FAR1 family protein | |
Araip.4ML8D | FAR1 family protein | |
Araip.4T95H | FAR1 family protein | |
Araip.4WN3Z | FAR1 family protein | |
Araip.4YL9A | FAR1 family protein | |
Araip.54I3D | FAR1 family protein | |
Araip.58W0H | FAR1 family protein | |
Araip.592E0 | FAR1 family protein | |
Araip.599VJ | FAR1 family protein | |
Araip.59WX5 | FAR1 family protein | |
Araip.5AF5M | FAR1 family protein | |
Araip.5BD6C | FAR1 family protein | |
Araip.5E4N3 | FAR1 family protein | |
Araip.5HG5J | FAR1 family protein | |
Araip.5NT6K | FAR1 family protein | |
Araip.5PH05 | FAR1 family protein | |
Araip.5Q0W7 | FAR1 family protein | |
Araip.5S8T1 | FAR1 family protein | |
Araip.5Z63N | FAR1 family protein | |
Araip.5ZI98 | FAR1 family protein | |
Araip.620M4 | FAR1 family protein | |
Araip.621Z6 | FAR1 family protein | |
Araip.62LNZ | FAR1 family protein | |
Araip.64TUX | FAR1 family protein | |
Araip.67JA6 | FAR1 family protein | |
Araip.6NM80 | FAR1 family protein | |
Araip.6VT6V | FAR1 family protein | |
Araip.72GC8 | FAR1 family protein | |
Araip.739PK | FAR1 family protein | |
Araip.73R6C | FAR1 family protein | |
Araip.75IHA | FAR1 family protein | |
Araip.75PTZ | FAR1 family protein | |
Araip.763PP | FAR1 family protein | |
Araip.76FUN | FAR1 family protein | |
Araip.76HPU | FAR1 family protein | |
Araip.7A2UP | FAR1 family protein | |
Araip.7D6EJ | FAR1 family protein | |
Araip.7D9KD | FAR1 family protein | |
Araip.7E330 | FAR1 family protein | |
Araip.7JR5V | FAR1 family protein | |
Araip.7R20U | FAR1 family protein | |
Araip.7U391 | FAR1 family protein | |
Araip.7UB2Y | FAR1 family protein | |
Araip.7Z70C | FAR1 family protein | |
Araip.80D5A | FAR1 family protein | |
Araip.82MLJ | FAR1 family protein | |
Araip.88THY | FAR1 family protein | |
Araip.8B8PN | FAR1 family protein | |
Araip.8E8UZ | FAR1 family protein | |
Araip.8HK8K | FAR1 family protein | |
Araip.8J51E | FAR1 family protein | |
Araip.8JT0Y | FAR1 family protein | |
Araip.8TA01 | FAR1 family protein | |
Araip.8WS8L | FAR1 family protein | |
Araip.8XF7G | FAR1 family protein | |
Araip.92VXE | FAR1 family protein | |
Araip.93IAG | FAR1 family protein | |
Araip.93X4C | FAR1 family protein | |
Araip.94GSC | FAR1 family protein | |
Araip.96KYW | FAR1 family protein | |
Araip.98TRK | FAR1 family protein | |
Araip.9B4G1 | FAR1 family protein | |
Araip.9D2L2 | FAR1 family protein | |
Araip.9D9Z5 | FAR1 family protein | |
Araip.9DA6B | FAR1 family protein | |
Araip.9IZ0T | FAR1 family protein | |
Araip.9N55L | FAR1 family protein | |
Araip.9N7IJ | FAR1 family protein | |
Araip.A0RJX | FAR1 family protein | |
Araip.A17BX | FAR1 family protein | |
Araip.A53VI | FAR1 family protein | |
Araip.A5G20 | FAR1 family protein | |
Araip.A7ITA | FAR1 family protein | |
Araip.A7VQW | FAR1 family protein | |
Araip.A7YM7 | FAR1 family protein | |
Araip.A85FN | FAR1 family protein | |
Araip.AA00I | FAR1 family protein | |
Araip.AB5PU | FAR1 family protein | |
Araip.AD1AX | FAR1 family protein | |
Araip.AEV9M | FAR1 family protein | |
Araip.AI6ER | FAR1 family protein | |
Araip.AK66U | FAR1 family protein | |
Araip.ART9V | FAR1 family protein | |
Araip.AU573 | FAR1 family protein | |
Araip.AU5HG | FAR1 family protein | |
Araip.AV6R9 | FAR1 family protein | |
Araip.AXS1W | FAR1 family protein | |
Araip.AXW4Y | FAR1 family protein | |
Araip.B175B | FAR1 family protein | |
Araip.B19EY | FAR1 family protein | |
Araip.B2ALV | FAR1 family protein | |
Araip.B2PYF | FAR1 family protein | |
Araip.B4UFU | FAR1 family protein | |
Araip.B89MP | FAR1 family protein | |
Araip.B9TR5 | FAR1 family protein | |
Araip.BCK9L | FAR1 family protein | |
Araip.BGP1E | FAR1 family protein | |
Araip.BK4FM | FAR1 family protein | |
Araip.BKN8B | FAR1 family protein | |
Araip.BP58N | FAR1 family protein | |
Araip.BQN0K | FAR1 family protein | |
Araip.BR161 | FAR1 family protein | |
Araip.BVD21 | FAR1 family protein | |
Araip.C0155 | FAR1 family protein | |
Araip.C0KRF | FAR1 family protein | |
Araip.C2P28 | FAR1 family protein | |
Araip.C3CAW | FAR1 family protein | |
Araip.C42RV | FAR1 family protein | |
Araip.C4B0R | FAR1 family protein | |
Araip.C4BGM | FAR1 family protein | |
Araip.C4R5H | FAR1 family protein | |
Araip.C9I3T | FAR1 family protein | |
Araip.CC9VW | FAR1 family protein | |
Araip.CF3N6 | FAR1 family protein | |
Araip.CM3S8 | FAR1 family protein | |
Araip.CP0XF | FAR1 family protein | |
Araip.CUC52 | FAR1 family protein | |
Araip.CVG02 | FAR1 family protein | |
Araip.D1GPC | FAR1 family protein | |
Araip.D3IBN | FAR1 family protein | |
Araip.D3STF | FAR1 family protein | |
Araip.D4AUE | FAR1 family protein | |
Araip.D577Y | FAR1 family protein | |
Araip.D7G59 | FAR1 family protein | |
Araip.D8IN0 | FAR1 family protein | |
Araip.D8U59 | FAR1 family protein | |
Araip.D99M2 | FAR1 family protein | |
Araip.DCT9V | FAR1 family protein | |
Araip.DEM20 | FAR1 family protein | |
Araip.DID43 | FAR1 family protein | |
Araip.DJ4NG | FAR1 family protein | |
Araip.DV2WW | FAR1 family protein | |
Araip.DW2B6 | FAR1 family protein | |
Araip.DX3JC | FAR1 family protein | |
Araip.DY1NU | FAR1 family protein | |
Araip.DZ4PL | FAR1 family protein | |
Araip.DZN00 | FAR1 family protein | |
Araip.E2IDH | FAR1 family protein | |
Araip.E2JUR | FAR1 family protein | |
Araip.E32FH | FAR1 family protein | |
Araip.E3A8Q | FAR1 family protein | |
Araip.E44AI | FAR1 family protein | |
Araip.E4JIB | FAR1 family protein | |
Araip.E4Y09 | FAR1 family protein | |
Araip.E5TT0 | FAR1 family protein | |
Araip.E8AYR | FAR1 family protein | |
Araip.EFA16 | FAR1 family protein | |
Araip.EFI4Q | FAR1 family protein | |
Araip.EHU5C | FAR1 family protein | |
Araip.ES9W6 | FAR1 family protein | |
Araip.EZ6NU | FAR1 family protein | |
Araip.EZD0N | FAR1 family protein | |
Araip.F4LE5 | FAR1 family protein | |
Araip.F5A4I | FAR1 family protein | |
Araip.F5A77 | FAR1 family protein | |
Araip.F7PFF | FAR1 family protein | |
Araip.F87BT | FAR1 family protein | |
Araip.FC1S9 | FAR1 family protein | |
Araip.FE18M | FAR1 family protein | |
Araip.FF4HT | FAR1 family protein | |
Araip.FG5GV | FAR1 family protein | |
Araip.FJL3S | FAR1 family protein | |
Araip.FNA3E | FAR1 family protein | |
Araip.FPJ3C | FAR1 family protein | |
Araip.FRS9U | FAR1 family protein | |
Araip.FW1RB | FAR1 family protein | |
Araip.FW38D | FAR1 family protein | |
Araip.G4K6Y | FAR1 family protein | |
Araip.G5Z1P | FAR1 family protein | |
Araip.G6M9W | FAR1 family protein | |
Araip.G9Q1I | FAR1 family protein | |
Araip.GV3ZT | FAR1 family protein | |
Araip.GZM57 | FAR1 family protein | |
Araip.H08Z9 | FAR1 family protein | |
Araip.H0CEM | FAR1 family protein | |
Araip.H0PL5 | FAR1 family protein | |
Araip.H1PDA | FAR1 family protein | |
Araip.H1YW5 | FAR1 family protein | |
Araip.H57LN | FAR1 family protein | |
Araip.H5HN3 | FAR1 family protein | |
Araip.H60UK | FAR1 family protein | |
Araip.HA1N2 | FAR1 family protein | |
Araip.HB5N9 | FAR1 family protein | |
Araip.HDW5H | FAR1 family protein | |
Araip.HGA1J | FAR1 family protein | |
Araip.HI284 | FAR1 family protein | |
Araip.HJ5NF | FAR1 family protein | |
Araip.HSH1H | FAR1 family protein | |
Araip.HTA9A | FAR1 family protein | |
Araip.HU43I | FAR1 family protein | |
Araip.I1DFI | FAR1 family protein | |
Araip.I7YET | FAR1 family protein | |
Araip.IDJ8V | FAR1 family protein | |
Araip.IDZ3P | FAR1 family protein | |
Araip.IM0DR | FAR1 family protein | |
Araip.IM4L6 | FAR1 family protein | |
Araip.IN117 | FAR1 family protein | |
Araip.IRU52 | FAR1 family protein | |
Araip.IY722 | FAR1 family protein | |
Araip.J1A84 | FAR1 family protein | |
Araip.J2WDJ | FAR1 family protein | |
Araip.J3PKV | FAR1 family protein | |
Araip.J4347 | FAR1 family protein | |
Araip.J7DAI | FAR1 family protein | |
Araip.J914T | FAR1 family protein | |
Araip.J9C6R | FAR1 family protein | |
Araip.JAE3N | FAR1 family protein | |
Araip.JC7Y8 | FAR1 family protein | |
Araip.JE1Y1 | FAR1 family protein | |
Araip.JF9VV | FAR1 family protein | |
Araip.JYS4T | FAR1 family protein | |
Araip.K03PB | FAR1 family protein | |
Araip.K06R1 | FAR1 family protein | |
Araip.K0PT4 | FAR1 family protein | |
Araip.K2P5I | FAR1 family protein | |
Araip.K54KT | FAR1 family protein | |
Araip.K64LC | FAR1 family protein | |
Araip.K6QMW | FAR1 family protein | |
Araip.K80PC | FAR1 family protein | |
Araip.K85GL | FAR1 family protein | |
Araip.KA2YS | FAR1 family protein | |
Araip.KIT2P | FAR1 family protein | |
Araip.KKN7S | FAR1 family protein | |
Araip.KL6XP | FAR1 family protein | |
Araip.KSF49 | FAR1 family protein | |
Araip.KY3RW | FAR1 family protein | |
Araip.L0BQU | FAR1 family protein | |
Araip.L179T | FAR1 family protein | |
Araip.L2HWC | FAR1 family protein | |
Araip.L71IU | FAR1 family protein | |
Araip.L7N6R | FAR1 family protein | |
Araip.L7T89 | FAR1 family protein | |
Araip.L92K3 | FAR1 family protein | |
Araip.LU396 | FAR1 family protein | |
Araip.LXK9L | FAR1 family protein | |
Araip.LY1EK | FAR1 family protein | |
Araip.M0HLL | FAR1 family protein | |
Araip.M1CIY | FAR1 family protein | |
Araip.M1PPS | FAR1 family protein | |
Araip.M2G3P | FAR1 family protein | |
Araip.M3P4E | FAR1 family protein | |
Araip.M4D5S | FAR1 family protein | |
Araip.M6DPT | FAR1 family protein | |
Araip.M9H9S | FAR1 family protein | |
Araip.MH7E2 | FAR1 family protein | |
Araip.MM455 | FAR1 family protein | |
Araip.MQ9VE | FAR1 family protein | |
Araip.MR2TJ | FAR1 family protein | |
Araip.MZJ7P | FAR1 family protein | |
Araip.N1N85 | FAR1 family protein | |
Araip.N2UDW | FAR1 family protein | |
Araip.N3AJU | FAR1 family protein | |
Araip.N513L | FAR1 family protein | |
Araip.N57VC | FAR1 family protein | |
Araip.N5IED | FAR1 family protein | |
Araip.N7NRE | FAR1 family protein | |
Araip.N9B34 | FAR1 family protein | |
Araip.NB3FG | FAR1 family protein | |
Araip.NGJ26 | FAR1 family protein | |
Araip.NH5RI | FAR1 family protein | |
Araip.NI7GI | FAR1 family protein | |
Araip.NKQ82 | FAR1 family protein | |
Araip.NLB4R | FAR1 family protein | |
Araip.NR7L2 | FAR1 family protein | |
Araip.P0SZ5 | FAR1 family protein | |
Araip.P12J8 | FAR1 family protein | |
Araip.P1QY3 | FAR1 family protein | |
Araip.P1TT9 | FAR1 family protein | |
Araip.P43PI | FAR1 family protein | |
Araip.P4X0Y | FAR1 family protein | |
Araip.P5VIS | FAR1 family protein | |
Araip.P6EKB | FAR1 family protein | |
Araip.P795K | FAR1 family protein | |
Araip.P9FMN | FAR1 family protein | |
Araip.PA8JR | FAR1 family protein | |
Araip.PBJ1N | FAR1 family protein | |
Araip.PF4SQ | FAR1 family protein | |
Araip.PJ0LD | FAR1 family protein | |
Araip.PT0VL | FAR1 family protein | |
Araip.PT3JP | FAR1 family protein | |
Araip.PU0FS | FAR1 family protein | |
Araip.PVK8S | FAR1 family protein | |
Araip.PY013 | FAR1 family protein | |
Araip.Q0SV8 | FAR1 family protein | |
Araip.Q49T6 | FAR1 family protein | |
Araip.Q9ZLY | FAR1 family protein | |
Araip.QG75W | FAR1 family protein | |
Araip.QJ0HK | FAR1 family protein | |
Araip.QNK6H | FAR1 family protein | |
Araip.QR01G | FAR1 family protein | |
Araip.QT81S | FAR1 family protein | |
Araip.QW6LV | FAR1 family protein | |
Araip.QYG3G | FAR1 family protein | |
Araip.QZ4E9 | FAR1 family protein | |
Araip.R1091 | FAR1 family protein | |
Araip.R1ISD | FAR1 family protein | |
Araip.R41VS | FAR1 family protein | |
Araip.R5E6U | FAR1 family protein | |
Araip.R5GXF | FAR1 family protein | |
Araip.R5TUD | FAR1 family protein | |
Araip.R6LDD | FAR1 family protein | |
Araip.R7L63 | FAR1 family protein | |
Araip.R8VZC | FAR1 family protein | |
Araip.RBS2M | FAR1 family protein | |
Araip.RC7DZ | FAR1 family protein | |
Araip.RF9E5 | FAR1 family protein | |
Araip.RK9DU | FAR1 family protein | |
Araip.RM4ZT | FAR1 family protein | |
Araip.RM7C3 | FAR1 family protein | |
Araip.RQ6P2 | FAR1 family protein | |
Araip.RS6LP | FAR1 family protein | |
Araip.RTT76 | FAR1 family protein | |
Araip.RWH4R | FAR1 family protein | |
Araip.RYN1Z | FAR1 family protein | |
Araip.S1QXI | FAR1 family protein | |
Araip.S2J45 | FAR1 family protein | |
Araip.S3SDU | FAR1 family protein | |
Araip.S69RF | FAR1 family protein | |
Araip.S6P3R | FAR1 family protein | |
Araip.S7G8I | FAR1 family protein | |
Araip.S802V | FAR1 family protein | |
Araip.SNG87 | FAR1 family protein | |
Araip.SPH3C | FAR1 family protein | |
Araip.T0HX0 | FAR1 family protein | |
Araip.T1CBQ | FAR1 family protein | |
Araip.T2RLW | FAR1 family protein | |
Araip.T513R | FAR1 family protein | |
Araip.T5EWY | FAR1 family protein | |
Araip.T65W7 | FAR1 family protein | |
Araip.T66PS | FAR1 family protein | |
Araip.TDI8T | FAR1 family protein | |
Araip.TGK8R | FAR1 family protein | |
Araip.TI3N9 | FAR1 family protein | |
Araip.TR7CC | FAR1 family protein | |
Araip.TS2UL | FAR1 family protein | |
Araip.TSF8M | FAR1 family protein | |
Araip.TXT1L | FAR1 family protein | |
Araip.TY0LX | FAR1 family protein | |
Araip.U02RS | FAR1 family protein | |
Araip.U04GE | FAR1 family protein | |
Araip.U4091 | FAR1 family protein | |
Araip.UD480 | FAR1 family protein | |
Araip.UF5MJ | FAR1 family protein | |
Araip.UH8S4 | FAR1 family protein | |
Araip.UJ8LG | FAR1 family protein | |
Araip.UL7CP | FAR1 family protein | |
Araip.UNH79 | FAR1 family protein | |
Araip.UW8U0 | FAR1 family protein | |
Araip.V2WCU | FAR1 family protein | |
Araip.V37WV | FAR1 family protein | |
Araip.V3U5X | FAR1 family protein | |
Araip.V41PV | FAR1 family protein | |
Araip.V5K8G | FAR1 family protein | |
Araip.V81BW | FAR1 family protein | |
Araip.VC3KW | FAR1 family protein | |
Araip.VHN6L | FAR1 family protein | |
Araip.VKQ77 | FAR1 family protein | |
Araip.VMB4S | FAR1 family protein | |
Araip.VQX17 | FAR1 family protein | |
Araip.VR3JZ | FAR1 family protein | |
Araip.VTE32 | FAR1 family protein | |
Araip.VY3ZX | FAR1 family protein | |
Araip.W21RY | FAR1 family protein | |
Araip.W3PJ9 | FAR1 family protein | |
Araip.W4GIV | FAR1 family protein | |
Araip.W4YCR | FAR1 family protein | |
Araip.W59LW | FAR1 family protein | |
Araip.W6DN5 | FAR1 family protein | |
Araip.WBA01 | FAR1 family protein | |
Araip.WL58S | FAR1 family protein | |
Araip.WQK42 | FAR1 family protein | |
Araip.WRR5C | FAR1 family protein | |
Araip.WT9GE | FAR1 family protein | |
Araip.WXN4V | FAR1 family protein | |
Araip.WYE3R | FAR1 family protein | |
Araip.X5VKC | FAR1 family protein | |
Araip.X63FE | FAR1 family protein | |
Araip.XCE6D | FAR1 family protein | |
Araip.XIS0I | FAR1 family protein | |
Araip.XJ1LT | FAR1 family protein | |
Araip.XP0YP | FAR1 family protein | |
Araip.XS1F4 | FAR1 family protein | |
Araip.XZ3D1 | FAR1 family protein | |
Araip.Y0NUV | FAR1 family protein | |
Araip.Y6XJM | FAR1 family protein | |
Araip.YD644 | FAR1 family protein | |
Araip.YF64E | FAR1 family protein | |
Araip.YG26I | FAR1 family protein | |
Araip.YI32S | FAR1 family protein | |
Araip.YK80Z | FAR1 family protein | |
Araip.YN1IJ | FAR1 family protein | |
Araip.YNQ3G | FAR1 family protein | |
Araip.YQA8N | FAR1 family protein | |
Araip.Z1ZCU | FAR1 family protein | |
Araip.Z2BGS | FAR1 family protein | |
Araip.Z34JG | FAR1 family protein | |
Araip.Z3VQJ | FAR1 family protein | |
Araip.Z68X5 | FAR1 family protein | |
Araip.Z6F82 | FAR1 family protein | |
Araip.Z9FN3 | FAR1 family protein | |
Araip.Z9RGJ | FAR1 family protein | |
Araip.ZEC5D | FAR1 family protein | |
Araip.ZJ28C | FAR1 family protein | |
Araip.ZJW3N | FAR1 family protein | |
Araip.ZKZ5I | FAR1 family protein | |
Araip.ZX1HW | FAR1 family protein |
We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.
We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885