PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Achn000061 | GATA family protein | |
Achn029831 | GATA family protein | |
Achn041731 | GATA family protein | |
Achn050821 | GATA family protein | |
Achn075641 | GATA family protein | |
Achn087801 | GATA family protein | |
Achn090761 | GATA family protein | |
Achn103011 | GATA family protein | |
Achn141581 | GATA family protein | |
Achn156151 | GATA family protein | |
Achn166151 | GATA family protein | |
Achn168361 | GATA family protein | |
Achn168691 | GATA family protein | |
Achn175411 | GATA family protein | |
Achn201441 | GATA family protein | |
Achn202561 | GATA family protein | |
Achn204501 | GATA family protein | |
Achn214671 | GATA family protein | |
Achn216441 | GATA family protein | |
Achn220811 | GATA family protein | |
Achn222051 | GATA family protein | |
Achn222061 | GATA family protein | |
Achn225631 | GATA family protein | |
Achn226221 | GATA family protein | |
Achn232901 | GATA family protein | |
Achn235071 | GATA family protein | |
Achn238601 | GATA family protein | |
Achn260421 | GATA family protein | |
Achn269641 | GATA family protein | |
Achn269971 | GATA family protein | |
Achn276611 | GATA family protein | |
Achn288481 | GATA family protein | |
Achn288921 | GATA family protein | |
Achn294851 | GATA family protein | |
Achn304771 | GATA family protein | |
Achn336101 | GATA family protein | |
Achn350421 | GATA family protein | |
Achn355491 | GATA family protein | |
Achn364571 | GATA family protein | |
Achn371091 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008