Program   blastp - (protein vs protein) blastx - (DNA vs protein)
Species   Arabidopsis thaliana Glycine max Oryza sativa subsp. japonica Populus trichocarpa Solanum lycopersicum Triticum aestivum Zea mays All Species - - - - - - - - - - - - - - - - - - - - - - Actinidia chinensisAegilops tauschiiAethionema arabicumAmaranthus hypochondriacusAmborella trichopodaAnanas comosusAquilegia coeruleaArabidopsis halleriArabidopsis lyrataArabidopsis thalianaArabis alpinaArachis duranensisArachis hypogaeaArachis ipaensisArtemisia annuaAuxenochlorella protothecoidesAzadirachta indicaBathycoccus prasinosBeta vulgarisBoechera strictaBrachypodium distachyonBrachypodium staceiBrassica napusBrassica oleraceaBrassica rapaCajanus cajanCamelina sativaCannabis sativaCapsella grandifloraCapsella rubellaCapsicum annuumCarica papayaCastanea mollissimaCatharanthus roseusChlamydomonas reinhardtiiChlorella variabilis NC64ACicer arietinumCitrullus lanatusCitrus clementinaCitrus sinensisCoccomyxa subellipsoidea C-169Coffea canephoraCucumis meloCucumis sativusDaucus carotaDianthus caryophyllusDichanthelium oligosanthesDorcoceras hygrometricumDunaliella salinaElaeis guineensisEragrostis tefEucalyptus camaldulensisEucalyptus grandisEutrema salsugineumFragaria vescaFragaria x ananassaGenlisea aureaGlycine maxGlycine sojaGonium pectoraleGossypium arboreumGossypium hirsutumGossypium raimondiiHelianthus annuusHelicosporidiumHordeum vulgareHumulus lupulusIpomoea trifidaJatropha curcasJuglans regiaKalanchoe laxifloraKalanchoe marnierianaKlebsormidium flaccidumLactuca sativaLeersia perrieriLinum usitatissimumLotus japonicusMalus domesticaManihot esculentaMarchantia polymorphaMedicago truncatulaMicromonas pusilla CCMP1545Micromonas sp. RCC299Mimulus guttatusMonoraphidium neglectumMorus notabilisMusa acuminataNelumbo nuciferaNicotiana benthamianaNicotiana sylvestrisNicotiana tabacumNicotiana tomentosiformisOcimum tenuiflorumOropetium thomaeumOryza barthiiOryza brachyanthaOryza glaberrimaOryza glumaepatulaOryza longistaminataOryza meridionalisOryza nivaraOryza punctataOryza rufipogonOryza sativa subsp. indicaOryza sativa subsp. japonicaOstreococcus lucimarinusOstreococcus sp. RCC809Ostreococcus tauriPanicum halliiPanicum virgatumPetunia axillarisPetunia inflataPhalaenopsis equestrisPhaseolus vulgarisPhoenix dactyliferaPhyllostachys heterocyclaPhyscomitrella patensPicea abiesPicea glaucaPicea sitchensisPicochlorum sp. SENEW3Pinus taedaPopulus euphraticaPopulus trichocarpaPrunus mumePrunus persicaPseudotsuga menziesiiPyrus bretschneideriRaphanus raphanistrumRaphanus sativusRicinus communisSaccharum officinarumSalix purpureaSalvia miltiorrhizaSelaginella moellendorffiiSesamum indicumSetaria italicaSetaria viridisSisymbrium irioSolanum lycopersicumSolanum melongenaSolanum pennelliiSolanum pimpinellifoliumSolanum tuberosumSorghum bicolorSphagnum fallaxSpinacia oleraceaSpirodela polyrhizaTarenaya hasslerianaThellungiella parvulaTheobroma cacaoTrifolium pratenseTriticum aestivumTriticum urartuUtricularia gibbaVigna angularisVigna radiataVigna unguiculataVitis viniferaVolvox carteriZea maysZiziphus jujubaZostera marinaZoysia japonicaZoysia matrellaZoysia pacifica
Enter a FASTA sequence  (or paste an example)
>CA12g14940 SKSLNSVDSNKEIEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFSTAEEAARAYDVEARRIRGNKAKVNFPDEAPVPAPRQAAKVNPEKVLSDESSNPVLSDTALMNLTDGCCNNLGFFEEKTKKLYGYEVLRTTTVNMGPNSYVPPPAAGVYFNSDQGSNSFDPSDFGWGETCSRTPEISSVLSAAIECDETQFVEGADVEVKLKSCSNNLVPDDGNTANKPPEEFPAFESQMKFFHTPYPEANWDVSVDAFLNADASQGGENAVDLWSIDELSSLMRGVY*
Scoring Matrix BLOSUM45 BLOSUM62 BLOSUM80 PAM30 PAM70
Filter Low complexity regions
Mask Mask lower case letters
Expect threshold